euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

221 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip79 chr1 17229454 17229454 . unknown germline . no 233 .
srip881 chr1 56535813 56535813 - unknown germline . no 233 .
srip1573 chr1 70408667 70408667 . unknown germline . no 233 LRRC7
srip3893 chr1 119553359 119553359 + unknown germline . no 233 .
srip4116 chr1 149308428 149308428 + unknown germline . no 233 LOC645262
srip4231 chr1 157292637 157292637 . unknown germline . no 233 .
srip4745 chr1 165553142 165553142 - unknown germline . no 233 .
srip5431 chr1 179575369 179575369 - unknown germline . no 233 TDRD5
srip6397 chr1 210211428 210211428 - unknown germline . no 233 SYT14
srip6846 chr1 221827812 221827812 - unknown germline . no 233 .
srip6998 chr1 225272510 225272510 + unknown germline . no 233 DNAH14
srip7184 chr1 233965195 233965195 - unknown germline . no 233 .
srip7569 chr10 5061314 5061314 - unknown germline . no 233 .
srip8111 chr10 23842050 23842050 - unknown germline . no 233 .
srip8474 chr10 25707693 25707693 - unknown germline . no 233 GPR158
srip9035 chr10 60914465 60914465 - unknown germline . no 233 .
srip10465 chr10 91543496 91543496 . unknown germline . no 233 .
srip10695 chr10 101104378 101104378 - unknown germline . no 233 CNNM1
srip11835 chr10 124455225 124455225 + unknown germline . no 233 .
srip12547 chr11 15380252 15380252 + unknown germline . no 233 .
srip12798 chr11 25123346 25123346 - unknown germline . no 233 .
srip13082 chr11 26833093 26833093 . unknown germline . no 233 .
srip13817 chr11 33670130 33670130 + unknown germline . no 233 C11orf41
srip13905 chr11 37806361 37806361 . unknown germline . no 233 .
srip15380 chr11 58171843 58171843 + unknown germline . no 233 .
srip17167 chr11 94684368 94684368 + unknown germline . no 233 .
srip17475 chr11 103615512 103615512 . unknown germline . no 233 .
srip17665 chr11 104556129 104556129 - unknown germline . no 233 .
srip17805 chr11 104623594 104623594 + unknown germline . no 233 .
srip18060 chr11 110377886 110377886 - unknown germline . no 233 .
srip18228 chr11 112084613 112084613 + unknown germline . no 233 BCO2
srip18540 chr11 123833069 123833069 . unknown germline . no 233 .
srip18563 chr11 127953038 127953038 . unknown germline . no 233 .
srip19264 chr11 134305645 134305645 - unknown germline . no 233 .
srip19758 chr12 11191379 11191379 - unknown germline . no 233 PRH1-PRR4
srip19909 chr12 11219195 11219195 - unknown germline . no 233 PRH1-PRR4
srip20120 chr12 12933687 12933687 - unknown germline . no 233 APOLD1
srip20465 chr12 25775847 25775847 - unknown germline . no 233 IFLTD1
srip20746 chr12 28226420 28226420 - unknown germline . no 233 .
srip21768 chr12 39956292 39956292 + unknown germline . no 233 ABCD2
srip22215 chr12 43256979 43256979 - unknown germline . no 233 .
srip22990 chr12 61184106 61184106 + unknown germline . no 233 .
srip23977 chr12 79338029 79338029 - unknown germline . no 233 SYT1
srip24409 chr12 84955208 84955208 - unknown germline . no 233 .
srip24902 chr12 85506283 85506283 + unknown germline . no 233 LRRIQ1
srip25185 chr12 97365536 97365536 - unknown germline . no 233 .
srip26902 chr13 22489798 22489798 + unknown germline . no 233 .
srip27826 chr13 38394905 38394905 + unknown germline . no 233 TRPC4
srip28586 chr13 61221163 61221163 - unknown germline . no 233 .
srip29069 chr13 61462340 61462340 - unknown germline . no 233 .
srip29636 chr13 61734486 61734486 . unknown germline . no 233 .
srip30966 chr13 79259790 79259790 - unknown germline . no 233 .
srip31568 chr13 85871605 85871605 - unknown germline . no 233 .
srip32313 chr13 91149416 91149416 - unknown germline . no 233 .
srip32400 chr13 91626227 91626227 + unknown germline . no 233 .
srip33525 chr13 104296230 104296230 - unknown germline . no 233 .
srip35223 chr14 28301256 28301256 + unknown germline . no 233 .
srip35261 chr14 28441169 28441169 - unknown germline . no 233 .
srip35854 chr14 36674752 36674752 + unknown germline . no 233 .
srip36778 chr14 44712090 44712090 + unknown germline . no 233 .
srip37173 chr14 55267489 55267489 + unknown germline . no 233 .
srip37335 chr14 59220393 59220393 + unknown germline . no 233 .
srip37397 chr14 59522425 59522425 - unknown germline . no 233 .
srip38619 chr14 86381803 86381803 - unknown germline . no 233 .
srip40236 chr15 47507335 47507335 - unknown germline . no 233 SEMA6D
srip41334 chr15 58329025 58329025 . unknown germline . no 233 ALDH1A2
srip42525 chr15 83551628 83551628 - unknown germline . no 233 HOMER2
srip42606 chr15 85140900 85140900 + unknown germline . no 233 .
srip43251 chr15 100931152 100931152 - unknown germline . no 233 .
srip45786 chr16 60860738 60860738 + unknown germline . no 233 .
srip46331 chr16 71028016 71028016 + unknown germline . no 233 HYDIN
srip47018 chr17 25303557 25303557 + unknown germline . no 233 .
srip47699 chr17 32813627 32813627 + unknown germline . no 233 .
srip47894 chr17 34272157 34272157 + unknown germline . no 233 .
srip47952 chr17 50476674 50476674 + unknown germline . no 233 .
srip47999 chr17 61281460 61281460 - unknown germline . no 233 TANC2
srip48162 chr17 64637284 64637284 + unknown germline . no 233 PRKCA
srip48968 chr18 15095255 15095255 - unknown germline . no 233 .
srip50088 chr18 49599980 49599980 . unknown germline . no 233 .
srip50191 chr18 50097749 50097749 - unknown germline . no 233 DCC
srip50741 chr18 51762737 51762737 - unknown germline . no 233 .
srip51521 chr18 73290639 73290639 - unknown germline . no 233 .
srip53471 chr2 23191008 23191008 - unknown germline . no 233 .
srip54274 chr2 36570260 36570260 - unknown germline . no 233 .
srip54643 chr2 42051410 42051410 + unknown germline . no 233 .
srip54767 chr2 49538166 49538166 - unknown germline . no 233 .
srip54771 chr2 51538840 51538840 + unknown germline . no 233 .
srip55195 chr2 67814315 67814315 - unknown germline . no 233 .
srip55707 chr2 78992035 78992035 - unknown germline . no 233 .
srip56217 chr2 82098035 82098035 + unknown germline . no 233 .
srip56589 chr2 91624166 91624166 + unknown germline . no 233 .
srip57356 chr2 117187382 117187382 + unknown germline . no 233 .
srip57367 chr2 118327787 118327787 - unknown germline . no 233 .
srip57738 chr2 129573979 129573979 + unknown germline . no 233 .
srip57944 chr2 138495070 138495070 . unknown germline . no 233 .
srip58560 chr2 144010786 144010786 + unknown germline . no 233 ARHGAP15
srip59196 chr2 147020925 147020925 + unknown germline . no 233 .
srip59630 chr2 156682286 156682286 - unknown germline . no 233 .
srip60678 chr2 184686853 184686853 . unknown germline . no 233 .
srip61631 chr2 212707192 212707192 + unknown germline . no 233 ERBB4
srip63460 chr20 16479499 16479499 - unknown germline . no 233 KIF16B
srip64026 chr20 25895497 25895497 - unknown germline . no 233 .
srip65550 chr21 14390190 14390190 - unknown germline . no 233 .
srip65857 chr21 19517305 19517305 - unknown germline . no 233 .
srip66920 chr21 29069178 29069178 + unknown germline . no 233 .
srip69894 chr3 5121248 5121248 . unknown germline . no 233 .
srip71072 chr3 26524455 26524455 - unknown germline . no 233 .
srip71956 chr3 39675882 39675882 . unknown germline . no 233 .
srip72779 chr3 56642621 56642621 - unknown germline . no 233 CCDC66
srip73541 chr3 70492623 70492623 - unknown germline . no 233 .
srip73793 chr3 75101217 75101217 + unknown germline . no 233 .
srip74858 chr3 82144861 82144861 - unknown germline . no 233 .
srip75585 chr3 85576556 85576556 + unknown germline . no 233 CADM2
srip75992 chr3 94357746 94357746 - unknown germline . no 233 .
srip76208 chr3 101279650 101279650 + unknown germline . no 233 .
srip76688 chr3 111133929 111133929 - unknown germline . no 233 .
srip76796 chr3 117236133 117236133 + unknown germline . no 233 .
srip77252 chr3 123590719 123590719 + unknown germline . no 233 MYLK
srip77604 chr3 133834825 133834825 + unknown germline . no 233 .
srip77839 chr3 137099497 137099497 . unknown germline . no 233 .
srip78639 chr3 151148548 151148548 - unknown germline . no 233 MED12L
srip80021 chr3 173917219 173917219 - unknown germline . no 233 NLGN1
srip80855 chr3 181192836 181192836 + unknown germline . no 233 .
srip81483 chr3 186372132 186372132 + unknown germline . no 233 .
srip82119 chr3 193354172 193354172 - unknown germline . no 233 OPA1
srip82354 chr4 9451067 9451067 + unknown germline . no 233 DEFB131
srip82451 chr4 13136460 13136460 + unknown germline . no 233 .
srip82983 chr4 18162684 18162684 - unknown germline . no 233 .
srip83947 chr4 33256268 33256268 - unknown germline . no 233 .
srip83956 chr4 35610475 35610475 + unknown germline . no 233 .
srip84713 chr4 47007787 47007787 - unknown germline . no 233 .
srip85072 chr4 49631781 49631781 . unknown germline . no 233 .
srip85381 chr4 57497060 57497060 - unknown germline . no 233 .
srip85975 chr4 60979565 60979565 - unknown germline . no 233 .
srip86174 chr4 66413931 66413931 + unknown germline . no 233 EPHA5
srip86314 chr4 66809062 66809062 . unknown germline . no 233 .
srip87924 chr4 87101806 87101806 + unknown germline . no 233 MAPK10
srip88311 chr4 98917746 98917746 + unknown germline . no 233 C4orf37
srip89015 chr4 104214678 104214678 + unknown germline . no 233 .
srip90347 chr4 115132699 115132699 + unknown germline . no 233 .
srip90575 chr4 118055510 118055510 + unknown germline . no 233 .
srip90801 chr4 120717537 120717537 - unknown germline . no 233 .
srip92208 chr4 134596423 134596423 + unknown germline . no 233 .
srip93229 chr4 147953943 147953943 - unknown germline . no 233 .
srip93740 chr4 157447968 157447968 + unknown germline . no 233 .
srip95385 chr4 190659701 190659701 + unknown germline . no 233 .
srip95492 chr5 3491823 3491823 - unknown germline . no 233 LOC285577
srip97230 chr5 26093147 26093147 + unknown germline . no 233 .
srip97349 chr5 32519184 32519184 + unknown germline . no 233 .
srip97740 chr5 33633341 33633341 - unknown germline . no 233 ADAMTS12
srip99142 chr5 57903406 57903406 . unknown germline . no 233 RAB3C
srip99167 chr5 61184813 61184813 + unknown germline . no 233 .
srip100101 chr5 84802156 84802156 + unknown germline . no 233 .
srip100727 chr5 89450775 89450775 + unknown germline . no 233 .
srip101082 chr5 96866415 96866415 + unknown germline . no 233 .
srip102548 chr5 109772093 109772093 - unknown germline . no 233 TMEM232
srip102792 chr5 118004277 118004277 - unknown germline . no 233 .
srip103602 chr5 135023720 135023720 . unknown germline . no 233 .
srip105249 chr5 155619871 155619871 + unknown germline . no 233 .
srip105748 chr5 161887255 161887255 + unknown germline . no 233 .
srip108166 chr6 38786333 38786333 . unknown germline . no 233 DNAH8
srip108287 chr6 45852704 45852704 - unknown germline . no 233 .
srip108726 chr6 46310300 46310300 . unknown germline . no 233 .
srip109528 chr6 63368201 63368201 + unknown germline . no 233 .
srip110493 chr6 74935583 74935583 - unknown germline . no 233 .
srip111051 chr6 77980645 77980645 - unknown germline . no 233 .
srip112045 chr6 91669514 91669514 - unknown germline . no 233 .
srip112399 chr6 99191778 99191778 - unknown germline . no 233 .
srip112721 chr6 102283765 102283765 - unknown germline . no 233 GRIK2
srip113629 chr6 141313859 141313859 + unknown germline . no 233 .
srip113806 chr6 142450105 142450105 - unknown germline . no 233 .
srip114752 chr6 148195798 148195798 + unknown germline . no 233 .
srip117714 chr7 57725695 57725695 . unknown germline . no 233 LOC100287663
srip118311 chr7 62492939 62492939 + unknown germline . no 233 .
srip121751 chr7 107829256 107829256 + unknown germline . no 233 NRCAM
srip122553 chr7 118165568 118165568 . unknown germline . no 233 .
srip122588 chr7 119446561 119446561 - unknown germline . no 233 .
srip122684 chr7 124451325 124451325 - unknown germline . no 233 .
srip123332 chr7 142818659 142818659 + unknown germline . no 233 .
srip124082 chr8 4452901 4452901 - unknown germline . no 233 CSMD1
srip124392 chr8 5829282 5829282 - unknown germline . no 233 .
srip126114 chr8 55583952 55583952 - unknown germline . no 233 .
srip126879 chr8 67381884 67381884 - unknown germline . no 233 .
srip127436 chr8 72399228 72399228 - unknown germline . no 233 .
srip127630 chr8 78512218 78512218 . unknown germline . no 233 .
srip128282 chr8 87315042 87315042 + unknown germline . no 233 .
srip128455 chr8 92186274 92186274 - unknown germline . no 233 LRRC69
srip129694 chr8 121906894 121906894 . unknown germline . no 233 .
srip131077 chr9 6290487 6290487 + unknown germline . no 233 .
srip131369 chr9 7741401 7741401 + unknown germline . no 233 .
srip131394 chr9 8344967 8344967 + unknown germline . no 233 PTPRD
srip131872 chr9 26451904 26451904 - unknown germline . no 233 .
srip133405 chr9 32463891 32463891 - unknown germline . no 233 DDX58
srip133619 chr9 34904794 34904794 - unknown germline . no 233 .
srip135091 chr9 105073661 105073661 . unknown germline . no 233 .
srip136503 chrX 14152007 14152007 - unknown germline . no 233 .
srip136779 chrX 25711261 25711261 . unknown germline . no 233 .
srip137224 chrX 54917144 54917144 + unknown germline . no 233 .
srip137356 chrX 55264659 55264659 - unknown germline . no 233 .
srip137571 chrX 55585154 55585154 - unknown germline . no 233 .
srip137608 chrX 56708594 56708594 + unknown germline . no 233 .
srip137614 chrX 57376700 57376700 . unknown germline . no 233 FAAH2
srip137617 chrX 57463295 57463295 + unknown germline . no 233 FAAH2
srip137648 chrX 57983999 57983999 - unknown germline . no 233 .
srip138026 chrX 63341727 63341727 - unknown germline . no 233 .
srip138352 chrX 66982762 66982762 - unknown germline . no 233 .
srip138512 chrX 73679072 73679072 . unknown germline . no 233 SLC16A2
srip139271 chrX 83190419 83190419 - unknown germline . no 233 .
srip139272 chrX 83337154 83337154 + unknown germline . no 233 RPS6KA6
srip139273 chrX 83856949 83856949 . unknown germline . no 233 .
srip139274 chrX 83931408 83931408 - unknown germline . no 233 .
srip139316 chrX 85363992 85363992 . unknown germline . no 233 .
srip139977 chrX 101873696 101873696 - unknown germline . no 233 ARMCX5-GPRASP2
srip140141 chrX 104256396 104256396 - unknown germline . no 233 IL1RAPL2
srip140193 chrX 107768409 107768409 - unknown germline . no 233 COL4A5
srip140232 chrX 108303683 108303683 - unknown germline . no 233 .
srip140464 chrX 111557754 111557754 - unknown germline . no 233 ZCCHC16
srip140473 chrX 111846715 111846715 - unknown germline . no 233 .
srip140812 chrX 119892837 119892837 - unknown germline . no 233 .
srip141377 chrX 129525275 129525275 - unknown germline . no 233 .
srip142273 chrY 13490336 13490336 + unknown germline . no 233 .